Table 7 Important biomarkers identified by DeepMKL + KPCA-IG in the BRCA dataset
From: Supervised multiple kernel learning approaches for multi-omics data integration
Omics data type | Biomarkers |
|---|---|
mRNA expression (15) | GABRP, SOX10, TFF1, KRT6B, AGR3, |
KLK7, SERPINB5, DSC3, KLK6, AGR2, | |
MIA, TRIM29, SLC6A14, KRT16, KLK8 | |
DNA methylation (10) | IGFBP4, RARA, NHLRC4, CA12, DNALI1, |
MIR26B, GPR37L1, RSAD1, RARG, NR2F6 | |
miRNA expression (10) | hsa-mir-224, hsa-mir-452, hsa-mir-505, hsa-mir-675, hsa-mir-577, |
hsa-mir-375, hsa-mir-18a, hsa-mir-196b, hsa-mir-511-2, hsa-mir-145 |